CDS

Accession Number TCMCG017C33690
gbkey CDS
Protein Id OMO54361.1
Location join(55162..55524,55951..56178,56274..56395,57276..57495,57640..57782,58304..58441,58638..58737)
GeneID InterPro:IPR000717
Organism Corchorus olitorius
locus_tag COLO4_36514

Protein

Length 437aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01023272.1
Definition hypothetical protein COLO4_36514 [Corchorus olitorius]
Locus_tag COLO4_36514

EGGNOG-MAPPER Annotation

COG_category J
Description component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
ko03051        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K03250        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko05160        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map05160        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000502        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003743        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005852        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006413        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008135        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030371        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031597        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044445        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045182        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905368        [VIEW IN EMBL-EBI]
GO:1905369        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAACTACGACTTAACCCCAAGAATTGCGCCGAATCTAGACAGGCACCTGGTTTTTCCGTTGCTAGAATTCTTGCAAGAGAGACAGCTACACCCAGATGAGCAGATCTTGAAAGCGAAGATCGAGCTCCTCAACAAGACCAACATGGTCGACTACGCTATGGATATCCACAAGAGCCTTTACCACACCGAAGATGTCCCTCAAGACATGATCGAGAGGAGGGCCGAGGTTGTCGCTCGTCTCAAGTCCTTGGAGGACGCCGCCGCTCCTTTGGTCGGTTTTCTGCAAAACCCTAATGCCGTTCAGGAATTGAGAGCTGATAAACATTATAATCTCCAGATGCTTAATGACCGTTACCAGATTGGCCCGGATCAGATAGAGGCATTATATCAGTATGCTAAATTCCAGTTTGAGTGTGGTAACTACTCTGGTGCTGCTGACTATCTGTATCAGTATAGAGCTCTATGCACAAACAGTGAAAGGAGTTTGAGTGCATTGTGGGGAAAGCTGGCAGCTGAGATACTGATGCAAAACTGGGATATTGCTCTCGAAGAACTAAACCGCTTGAAAGAAATTATAGATTCTAAGAGTTTCTCCTCACCCTTGAACCAAGTACAGAGTAGAATATGGCTGATGCATTGGAGCCTCTTCATCTTTTTTAACCATGACAACGGAAGAACACAGATCATCGACCTGTTTAATCAAGACAAATATCTAAATGCCATACAGACCAGTGCTCCTCATCTTTTAAGATACTTAGCAACTGCTTTTATTGTCAACAAGAGGAGACGACCTCAATTCAAAGAATTTATCAAGGTTGTCCAGCAAGAGCAATACTCTTACAAAGATCCCATCACAGAGTTTTTGGCATGTGTTTATGTCAATTATGACTTTGATGGAGCACAAAAGAAGATGAGGGAGTGTGAAGAAGTTATACTGAATGATCCCTTCCTAGGAAAAAGAGTTGAAGAAGGCAGCTTTTCCACTGTCCCACTAAGAGATGAATTCCTTGAGAATGCTCGTCTCTTCATCTTTGAGACATACTGCAGAATTCATCAGCGCATTGACATGGGGGTGCTTGCTGAGAAGTTGAATTTAAATTATGAGGACGCTGAGAGGTGGATTGTGAATCTTATCCGAAACTCAAAGCTTGATGCCAAGATTGATTCAAAGACGGGAACTGTTATTATGGAGCCTAATTATCCCAACATTCATGAGCAGTTAATAGACCACACCAAGGCACTCCAAGGGCGTACGTACAAGCTAGTCAGCCAGCTTCTTGAACACACACAAACACAAGCTGCTCGATAA
Protein:  
MANYDLTPRIAPNLDRHLVFPLLEFLQERQLHPDEQILKAKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMIERRAEVVARLKSLEDAAAPLVGFLQNPNAVQELRADKHYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDIALEELNRLKEIIDSKSFSSPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLATAFIVNKRRRPQFKEFIKVVQQEQYSYKDPITEFLACVYVNYDFDGAQKKMRECEEVILNDPFLGKRVEEGSFSTVPLRDEFLENARLFIFETYCRIHQRIDMGVLAEKLNLNYEDAERWIVNLIRNSKLDAKIDSKTGTVIMEPNYPNIHEQLIDHTKALQGRTYKLVSQLLEHTQTQAAR